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Publications

2015

  • Givli S., “Contraction Induced Muscle Injury: Towards Personalized Training and Recovery Programs”, Annals of Biomedical Engineering, 43(2): 388-403.
  • Benichou I., Givli S., “Rate dependent response of nanoscale structures having a multiwell energy landscape”, Physical Review Letters, 095504.
  • Katz S., Givli S., “The post-buckling behavior of a beam constrained by springy walls”, Journal of the Mechanics and Physics of Solids, 78: 443-466.

2014

  • Cohen T. , Givli S., “Dynamics of a discrete chain of bi-stable elements: A biomimetic shock absorbing mechanism” , Journal of the Mechanics and Physics of Solids, 64: 426-439.
  • Shemtov-Yona K. and Rittel D., “Failure analysis of dental implants”, Engineering Failure Analysis, 38, 58-65
  • Shemtov-Yona K., Rittel D. and Dorogoy A., “Mechanical assessment of grit blasting surface treatments of dental implants”, J. Mechanical Behavior of Biomaterials, 39, 375-390.
  • Atia L., Givli S., “Biological membrane response to temperature gradients at the single cell level” , Journal of the Royal Society Interface, 11: 20131207.

2013

  • Adler Y., Givli S., “Closing the loop: lamellipodia dynamics from the perspective of front propagation” , Physical Review E, 88: 042708.
  • Benichou I., Givli S. “Structures undergoing discrete phase transformations”, Journal of the Mechanics and Physics of Solids, 61: 94-113, 2013.
  • Haber, S., Clark, A. and Tawhai, M. “Blood flow in capillaries of the human lung.” (accepted to J. of Biomech. Eng., 2013).
  • Henry, F.S., Haber, S., Haberthür, D., Filipovic, N., Milasinovi, D., Schittny, J.C., Tsuda, A. “The simultaneous role of an alveolus as flow mixer and flow feeder for the deposition of inhaled submicron particles.” (accepted to J. of Biomech. Eng., 2013).
  • Moiseyev, G. & Bar-Yoseph, P.Z. “Computational modeling of thrombosis as a tool in the design and optimization of vascular implants.” Journal of Biomechanics, Vol. 46, No. 2, 18 January 2013, pp. 248-252.
  • Moiseyev, G., Givli, S., Bar-Yoseph, P.Z. “Fibrin polymerization in blood coagulation—A statistical model.” Journal of Biomechanics, Vol. 46, No. 1, 4 January 2013, pp. 26-30.
  • Podshivalov, L., Gomes, C., Zocca, A., Guenster, A., Bar-Yoseph, P.Z. and Fischer, A. “Design, Analysis and Additive Manufacturing of Porous Structures for Biocompatible Microscale Scaffolds.” CIRP Conference on BioManufacturing (CIRP-BioM 2013), March 3-5, 2013, Tokyo, Japan. Best Paper Award – Second Prize.

2012

  • Shemtov-Yona K., Rittel D., Levin L. and Machtei E., ”Effect of Dental Implant Diameter Fatigue Performance. Part I: Fatigue performance”, Clinical Implant Dentistry and Related Research, 16(2),172-177.
  • Shemtov-Yona K., Rittel D., Machtei E. and Levin L., ”Effect of Dental Implant Diameter on Fatigue Performance. Part II: Failure Analysis”, Clinical Implant Dentistry and Related Research, 16(2),178-184.
  • Shemtov-Yona K., Rittel D., Levin L. and Machtei E., ”The effect of oral-like environment on dental implants’ fatigue performance”, Clinical Oral Implants Research 25, 2,e166-e170.
  • Givli S., Giang H., Bhattacharya K., 2012, “Stability of multi-component biological membranes”, SIAM Journal of Applied Mathematics, 72(2): 489-511.
  • Atia L., Givli S., 2012, “Biological membranes as an adaptive material for engineering applications”, Int. J. Solids Structures, 49: 2617-2624.
  • Setter, E., Bucher, I. and Haber, S. “Low Reynolds number swimmer utilizing surface travelling waves-analytical and experimental study”. Phys. Rev. E, 85 , 066304-066316, (2012).
  • Salib, A. and Haber, S. “Is the cutoff radius in DPD simulations with a fluid of constant density arbitrary?” Computer Phys. Comm. 183, (8), 1714–1718, (2012).

2011

  • Benichou I, Givli S., “The hidden ingenuity in titin structure,” Applied Physical Letters, volume 98, 091904, 2011.
  • Bercovici M., Kaigala G.V., Mach K.E., Han C.M., Liao J.C., and Santiago J.G., “Rapid detection of urinary tract infections using isotachophoresis and molecular beacons”, Analytical Chemistry, 2011, 83 (11), pp 4110-4117.
  • Heepe, L., Varenberg, M., Itovich, Y., Gorb, S., Suction component in adhesion of mushroom-shaped microstructure, J. R. Soc. Interface 8 (2011) 585-589 (cover story).

2010

  • Bercovici M., Kaigala G.V., Backhouse C.J., and Santiago J.G., “Fluorescent carrier ampholytes assay for portable, label-free detection of chemical toxins in tap water,” Analytical Chemistry, 2010, 82, 1858-1866.
  • Crowdy, D.G. and Or, Yizhar, “Two-dimensional point singularity model of a low Reynolds number swimmer near a wall”, Physical Review E 81(3): 036313, 2010.
  • Fong*, E., Tzlil*, S. and Tirrell, D.A., “Boundary crossing in epithelial wound healing,” PNAS, 107, 19302-19307, 2010. (* These authors contributed equally to this work.)
  • Givli S., 2010, “Towards Multi-Scale Modeling of Muscle Fibers”, Journal of Theoretical Biology, 264: 882-892.
  • Gottlieb O., and Cohen A., Self-excited oscillations of a string on an elastic foundation subject to a nonlinear feed-forward force, Int. J. Mechanical Sciences, 52, 1535-1545, 2010.
  • Gottlieb O, Ioffe L., Chipkin S.R. and Chait Y., “Self-excited oscillations of a system model of the human thyroid”, Proc. Dynamic System sand Control Conf., Sept. 13-15, Boston, ASME-DSCC, Paper # 4287, 1-8, 2010.
  • Kaigala G.V., Bercovici M., Behnam M., Elliott D., Santiago J.G., and Backhouse C.J., “Miniaturized system for isotachophoresis assays”, Lab on a Chip, 2010, vol. 10, no. 17, p. 2242.
  • Moiseyev, G. and Bar-Yoseph, P.Z., “No Need for Particle Tracing: From Accumulating Fluid Properties to Novel Blood Coagulation Model in the Lattice Boltzmann Method”, Journal of Biomechanics, Vol. 43, 864-870, 2010.
  • Or, Y., “Dynamics and stability of Purcell’s three-link microswimmer near a wall”, Physical Review E 82(6):065302(R), 2010.
  • Podshivalov, L., Fischer, A. and Bar-Yoseph, P.Z., “Multiresolution 2D Geometric Meshing for Multiscale Finite Element Analysis of Bone Micro-Structures”, Journal of Virtual and Physical Prototyping, Vol. 5, 33-43, 2010.
  • Podshivalov, L., Fischer, A. and Bar-Yoseph, P.Z., “3D hierarchical geometric modeling and multiscale FE analysis as a base for individualized medical diagnosis of bone structure”, BONE, 2010, doi: 10.1016/j.bone.2010.12.022.
  • Varenberg, M., Pugno, N., Gorb, S., Spatulate structures in biological fibrillar adhesion, Soft Matter 6 (2010) 3269-3272 (cover story).
  • Xie, F., Wang, Y., Wang, W., Li, Z., Yossifon, G. and Chang, H.C., Preparation of Rhombus-Shaped Micro/Nanofluidic Channels with Dimensions Ranging from Hundred Nanometers to Several Micrometers, Journal of Nanoscience and Nanotechnology Vol. 10, 7277–7281, 2010.
  • Yossifon, G., Mushenheim, P., Chang, Y.-C. and Chang, H.-C., Eliminating the Limiting-Current Phenomenon by Geometric Field Focusing into Nanopores and Nanoslots, Phys. Rev. E 81, 046301 (2010).
  • Yossifon, G. and Chang, H.-C., Changing nanoslot ion flux with a dynamic nanocolloid ion-selective filter: Secondary overlimiting currents due to nanocolloid-nanoslot interaction, Phys. Rev. E 81, 066317 (2010).
  • Zacksenhouse M., R. Bogacz and P. Holmes, Robust versus optimal strategies for two-alternative forced choice tasks, J Mathematical Psychology. Doi:10/1016/j.jmp.2009.12.004, 2010.

2009

  • Ben-Haim, Y., M. Zacksenhouse, C. Keren, and C.C. Dasco, Do we know how to set decision thresholds for diabetes? Medical Hypothesis, 73:189-193, 2009.
  • Bercovici M., Lele S.K., and Santiago J.G., “Open source simulation tool for electrophoretic stacking, focusing, and separation,” Journal of Chromatography A, 1216, 2009 1008-1018.
  • Chang, H.-C. and Yossifon, G., Understanding Electrokinetics at the Nanoscale: A Perspective, Biomicrofluidics 3, 012001, 2009.
  • Givli S., Bhattacharya K., “A coarse-grained model of the myofibril: Overall dynamics and the evolution of sarcomere non-uniformities”, Journal of the Mechanics and Physics of Solids, Volume 57(2), 2009, 221-243.
  • H.L., Q. Ye, and M. Zacksenhouse, Return-maps, characterization and cycle-wise planning of yoyo playing. IEEE Trans Robotics 25(2):438-444, 2009.
  • Klein, S., Kuhn, J., Avrahami, R., Tarre, S., Beliavski, M., Green, M., Zussman, E., “Encapsulation of bacterial cells in electrospun microtubes,” Biomacromolecules, 2009.
  • Or, Y. and Murray, Richard M.,“Dynamics and Stability of a Class of Low Reynolds Number Swimmers Near a Wall”, Physical Review, E 79(4): 045302R, 2009.
  • Ouaknin, G. and Bar-Yoseph, P.Z., “Stochastic Collective Movement of Cells and Fingering Morphology: No Maverick Cells”, Biophysical Journal, Vol. 97(7), 1811-1821, 2009 + Supporting Material (http://www.cell.com/biophysj/supplemental/S0006-3495(09)01196-5).
  • Podshivalov, L., Holdstein, Y., Fischer, A., and Bar-Yoseph, P.Z., “2D Multi-Scale Finite Elements Analysis as a Base for a 3D Computerized Bone Diagnostic System”, International Journal of Communications in Numerical Methods in Engineering (JNCNM), Online in advance of print, Vol. 25, No.2, 2009.
  • Podshivalov, L., Holdstein, Y., Fischer, A., and Bar-Yoseph, P.Z., “Towards a Multi-scale Computerized Bone Diagnostic System: 2D Micro-scale Finite Element Analysis”, Commun. Numer. Meth. Engng, Vol. 25, 733-749, 2009.
  • Varenberg, M., Gorb, S., Hexagonal surface micropattern for dry and wet friction, Adv. Mater. 21 (2009) 483-486.
  • Yossifon, G., Mushenheim, P., Chang, Y.-C., and Chang, H.-C. Nonlinear Current-Voltage Characteristics of Nano-Channels, Phys. Rev. E, 79, 046305, 2009.
  • Zacksenhouse M., S. Nemets, M.A. Lebedev, and M.A.L. Nicolelis, Robust satisficing linear regression: Performance/ robustness trade-off and consistency criterion, Mechanical Systems and Signal Processing, Special issue on Inverse Problems. Doi 10.1016/j.ymssp.2008.09.008, 23(6):1954-1964, 2009.

Prior to 2009

  • Dror, Y., Kuhn, J., Avrahami, R., and Zussman, E., “Core-shell Electrospun Fibers: Encapsulation of Enzymes,” Macromolecules 41(12), 4187–4192, 2008.
  • Dror, Y., Ziv, T., Makarov, V., Wolf, H., Admon, A., and Zussman, E., “Nanofibers made of globular proteins,” Biomacromolecules 9, 2749–2754, 2008.
  • Glozman, D., Shoham, M.: “Image-guided Robotic Flexible Needle Steering,” IEEE Transactions on Robotics, Vol. 23, No. 3, pp. 459-467, 2007.
  • Glozman, D., Shoham, M.: ”Flexible Needle Steering for Percutaneous Therapies,” Journal of Computer Aided Surgery, Vol. 11, No. 4, pp. 194-201, 2006.
  • Holdstein, Y., Podshivalov, L., Fischer, A., and Bar-Yoseph, P.Z., “A Neural Network Technique for Re-meshing of Bone Micro-Structure”, Int. J. of Shape Modeling, Vol. 14, No. 1, 1-14, 2008.
  • Joskowicz, L., Shamir, M., Freiman, M., Shoham, M., Zehavi, E., Umansky, F., Shoshan, Y.: “Image-Guided System with Miniature Robot for Precise Positioning and Targeting in Keyhole Neurosurgery,” Journal of Computer Aided Surgery, Vol. 11, No. 4, pp. 181-193, 2006.
  • Kosa, G., Shoham, M., Zaaroor, M. :”Propulsion Method for Swimming Micro-Robots,” accepted for Publication in IEEE Transactions on Robotics, Vol. 2, No. 1, pp. 137-150, 2007.
  • Sharon, N., Bar-Yoseph, P.Z., Bormusov, E., and Dovrat, A., “Simulation of Heat Exposure and Damage to the Eye Lens in a Neighborhood Bakery”, Experimental Eye Research, Vol. 87, 49-55, 2008.
  • Shoham, M., Burman, M., Zehavi, E., Joskowicz, L., Batkilin, E., Kunicher Y.: “Bone-Mounted Miniature Robot for Surgical Procedures: Concept and Clinical Applications,” IEEE Transactions on Robotics and Automation, Vol. 19, No. 5, pp. 893-901, 2003.
  • Shoham, M., Lieberman, I. H., Benzel, E. C., Togawa, D., Zehavi, E., Zilberstein, B., Fridlander, A., Joskowicz, L., Brink-Danan, S., Knoller, N.: “Robotic Assisted Spinal Surgery – From Concept to Clinical Practice,” Journal of Computer Aided Surgery, Volume 12, No. 2, pp. 105-115, 2007.
  • Srouji, S., Kizhner, T., Suss-Tobi, E., Livne, E., and Zussman, E., “3-D nanofibrous electrospun nanofibrous multilayerd construct is an alternative ECM Mimicking scaffold,” Journal of Materials Science: Materials in Medicine, 19(3), 1249-1255, 2008.
  • Togawa, D., Kayanja, M., Reinhardt, M.K., Shoham, M., Balter, A., Friedlander, A., Knoller, N., Benzel, E.C., Lieberman, I.H. :”Bone-Mounted Miniature Robotic Guidance for Pedicle Screw and Translaminar Facet Screw Placement: Part 2 – Evaluation of System Accuracy,” Neurosurgery, Vol. 60, Operative Neurosurgery 1, pp. 129- 139, 2007.
  • Tzezana, R., Zussman, E. and Levenberg, S., “A Layered Ultra-Porous Scaffold for Tissue Engineering, created via a Hydrospinning Method,” Tissue Engineering C, 14(4), 281-288, 2008.
  • Wolf, A., Shoham, M., Schnider, M., Roffman, M.: “Feasibility Study of a Mini Robotic System for Spinal Operations: Analysis, and Experiments,” Spine Journal, Vol. 29, No. 2, pp. 220-228, 2004.
  • Yarin, A.L., Zussman, E., Greiner, A., and Wendorff, J.H., “Material encapsulation and transport in core-shell micro/nanofibers, polymer and carbon nanotubes and micro/nano channels,” J. of Materials Chemistry, 17, 2585-2599, 2007.
  • Zaaroor, M., Kósa, G., Peri-Eran, A., Maharil, I., Shoham, M., Goldsher, D.: “Morphological Study of the Spinal Canal Content for Subarachnooid Endoscopy,” Journal of Minimally Invasive Neurosurgery, Vol. 49, No. 4, pp. 220-226, 2006.
  • Zussman, E., Yarin, A.L. and Nagler, R.M., “Age – and flow- dependency of salivary viscoelasticity,” J. of Dental Research. 86 (3), 281-285, 2007.